Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVLSRKINEAIQIGADIEVKVIAVEGDQVKLGIDAPKHIDIHRKEIYLTIQEENNRAAALSSDVISALSSQKK
1VPZ Chain:A ((2-55))-LILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEK-------------------


General information:
TITO was launched using:
RESULT:

Template: 1VPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 110 -18251 -165.91 -337.97
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -165.91
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_1VPZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VPZ-query.scw
PDB file : Tito_Scwrl_1VPZ.pdb: