Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHYSHSDIEEAVKSAKKE---------GLKDYLYQEPHGKKRSHKKSHRTHKKSRSHKKSYCSHKKSRSHKKSFCSHKKSRSHKKSYCSHKKSRSHKKSYRSHKKSRSYKKSYRSYKKSRSYKKSCRSYKKSRSYKKSYCSHKKKSRSYKKSCRTHKKSYRSHKKYYKKPHHHCDDYKRHDDYDSKKEYWKDGNCWVVKKKYK
4C4P Chain:B ((44-78))-RSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 9 -742 -82.44 -28.54
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -82.44
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_4C4P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C4P-query.scw
PDB file : Tito_Scwrl_4C4P.pdb: