Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEWNKTKSIFIVAFLILDIFLGYQFFQKWQATGKEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVD----KSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQI----QKESLITEMDAVELLYYQNQL---------------------KEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDTDQ
4K90 Chain:B ((35-207))-----------------------------------------------------------------------------------------------------------------QSYVEVATQHVKMIAP-DATFRVVDDHYVGDNGVAHVHFRQTANGLDIDN---------ADFNVNVGKDGKVFSYGNSFYTGQIPSSAALTKRDFSDPVTALKGTTNTLQLPITVDSASSESTKESYVFKGVSGTVSDPKAKLVYFVKD----DGTLALAWRVETDIDS---N--W---LLTYIDAKSGEEIH---


General information:
TITO was launched using:
RESULT:

Template: 4K90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 545 16244 29.80 114.39
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : 29.80
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4K90.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K90-query.scw
PDB file : Tito_Scwrl_4K90.pdb: