Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVYQTKRDVPVTLMIVFLILLIQADAIVPFVLGNMRVSGWIIFILLTLLNGLIIWSFIDLKYVLKEHHLIIKAGLIKHQIPYENIDKVVQKKKLWSGFRLIGSRHAITIYYQGGWGHAVISPQKSEEFIHKLKEKNSNIIIFTKSK
1VJQ Chain:A ((41-67))-------------------------------------------------------------------------------------------------------------------VVILIPSDMVEWFLEMLKAKGIPFTVY----


General information:
TITO was launched using:
RESULT:

Template: 1VJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 29 -10549 -363.76 -390.70
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.44

3D Compatibility (PKB) : -363.76
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.44
QMean score : 1.143

(partial model without unconserved sides chains):
PDB file : Tito_1VJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VJQ-query.scw
PDB file : Tito_Scwrl_1VJQ.pdb: