Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQV--GAEIVSPGSVLVSGRLLSDITRALPNKPVDV-HVEGNRVALTCGNARFSLPTMPVEDYPTLPTLPEETGL-LPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLA-ATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVAD--RGAQVRMEFADGSVRLSAGADDVGRAEEDL-VVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG |
| 2AVT Chain:A ((2-376)) | ------------IQFSINRTLFIHALNTTKRAISTKNAIPILSSIKIEVTSTGVTLTGSNGQISIENTIPVGLLITSPGAILLEASFFINIISSLPDISINVKEIEQHQVVLTSGKSEITLKGKDVDQYPRLQEVSTENPLILKTKLLKSIIAETAFAASLQESRPILTGVHIVLSNHKDFKAVATDSHRMSQRLITLDNTSADF--MVVLPSKSLREF--SAVFTDDIE----TVEVFFSPSQILFRSEHISFYTRLLEGNYPDTDRLLMTEFETEVVFNTQSLRHAMERAFLISNATQNGTVKLEITQNHISAHVNSPEVGKVNEDLDIVSQSGSDLTISFNPTYLIESLKAIKSETVKIHFLSPVRPFTLTP--GDEEE---------------SFIQLITPVR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249692 for 2839 contacts (-88.0/contact) +
2D Compatibility (PS) -39310 + (NN) -15831 + (LL) 1480
1D Compatibility (HY) -26000 + (ID) 5200
Total energy: -334553.0 ( -117.84 by residue)
QMean score : 0.570
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