Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGSVDRPDQNRGERSMKSPGLDLVRRTLDEARAAARARGQDAGRGRVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSAVVGHQIAE----HARPTALNDGVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKITGPAAPSWRKGPRHIAGRGPRDTYG |
| 1TH5 Chain:A ((167-224)) | --------------------------------------------------------------------------------------------------------EIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAA--VVRTVRIAVSKKLREKIPS--IQIVQL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35497 for 306 contacts (-116.0/contact) +
2D Compatibility (PS) -5533 + (NN) 704 + (LL) 5132
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -39044.0 ( -127.59 by residue)
QMean score : 0.361
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