Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEAINATIQRILRTDRGITANQV-----LVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA
2CNR Chain:A ((5-72))
-QEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2CNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30747 for 417 contacts (-73.7/contact) +
2D Compatibility (PS) -6728 + (NN) -1998 + (LL) 1512
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -45561.0 ( -109.26 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2CNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CNR-query.scw
PDB file :
Tito_Scwrl_2CNR.pdb
: