Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFA--ALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRI------DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPY----DIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH |
| 3VNQ Chain:A ((41-445)) | -----------FREVAATAPERTALSAEDDR-ISYGRLDAWSDAVARTLLAEGVRPGDRVALRMSPGAEAIVAILAILKCGAAYVPVDLRNPVSRSDFILADSG-----ASALIGEPHEGCAV-------TRVVRTAAVAECKDAE------A----------PGPGAEDMAYVIYTSGTTGNPKGVPVRHANVLALLAGAPSVFDFSGDD---RWL-LFHSLSFDFSVWEIWGAFSTGAELVVLPHWAARTPEQYLAVIIDRGVTVINQTPTAFLALTEAAVRGGRDVSG-----LRYVIFGGEKLTAPMLRPWAKAF---GLDRPRLVNGYGITETTVFTTFEE-----ITEAYLAQDASIIGRALPSFGTRVVGDDGRDVAPG-ETGELWLSGAQL-AEGYLRRPELTA---EKFPEV-----------VRYYRTGDLVSELPDGRFAYEGRADLQIKLRG-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272871 for 3230 contacts (-84.5/contact) +
2D Compatibility (PS) -40959 + (NN) -14572 + (LL) 12860
1D Compatibility (HY) -15200 + (ID) 5500
Total energy: -336242.0 ( -104.10 by residue)
QMean score : 0.424
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