Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSC-AVCTQACH
2MSQ Chain:A ((1-14))
-----------------------------------------------------------------------------------------------------SCGGSCFGGCW-GC-
General information:
TITO was launched using:
RESULT:
Template:
2MSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3720 for 36 contacts (-103.3/contact) +
2D Compatibility (PS) -1231 + (NN) 615 + (LL) 9148
1D Compatibility (HY) -800 + (ID) 300
Total energy: 3712.0 ( 103.11 by residue)
QMean score : 1.122
(partial model without unconserved sides chains):
PDB file :
Tito_2MSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MSQ-query.scw
PDB file :
Tito_Scwrl_2MSQ.pdb
: