Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYTLRRRSLLAEVYSGRTGVSEVCDANPYLLRAAKFHGKPSRVICPICRKEQLTLVSWVFGEHLGAVSGSARTAEELILLATRFSEFAVHVVEVCRTCSWNHLVKSYVLGAARPARPPRGSGGTRTARNGARTASE |
2KDX Chain:A ((89-109)) | -----------------------------------------DYGVCEKCHSKNVIITQ---GNEM------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1993 for 63 contacts (-31.6/contact) +
2D Compatibility (PS) -1977 + (NN) 532 + (LL) 7596
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 2808.0 ( 44.57 by residue)
QMean score : 0.117
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