Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPV----LTLYGIPHRDCGSYASGG---FATG--TDYRGWIDAVASGLGSSP---ATIIVEPDALA-MADCLSPDQ----RQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWL--------SAEAMAARLNDVGVGRA-RGFSLNVSNF----------YTTD----EEIGYGEAISGLTNG----SHYVIDTSRNGAGPAPDAPL-NWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGT-----------CGRGE-----PQAGRFVSQYAIDLAHNAGQ |
| 1OCB Chain:A ((44-359)) | ---------------------------------------------------------------------------------------------------------------------------VPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNAN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54036 for 1956 contacts (-27.6/contact) +
2D Compatibility (PS) -27712 + (NN) -16893 + (LL) 8988
1D Compatibility (HY) -17200 + (ID) 4600
Total energy: -111453.0 ( -56.98 by residue)
QMean score : 0.421
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