Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIDISAGTIHYEATGPETGRPVVFVHGYMMGGQLWRRVSERLAGRGLRCIAPTWPLGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDTG-GVVTQLVAVHYPERLGALVLTSCDAFEHFPPPILKPVIL-------AAKSATLFRAAIQVMRAPAARNRAYAGLSH--HNIDH-----LTRAWVRPALSNPAIAEDLRQLSLSLRTEVTTAVAARLPEFDKPALIAWSADDVFFALENGQR-LAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT |
| 4ITV Chain:A ((15-255)) | ----------LYYEDHG--TGTPVVLIHGFPLSGHSWERQSAALLDAGYRVI--TYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLAS----------LEPFLLKTDDNPDGAAPQEFFDGIVAAVKAD--RYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAP--TTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ITV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166967 for 1836 contacts (-90.9/contact) +
2D Compatibility (PS) -23927 + (NN) -9686 + (LL) 3036
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -215344.0 ( -117.29 by residue)
QMean score : 0.383
|
|
|