Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVCDGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIY-GIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAVAVLARWRFRRRPAPARLPLWACGAADLTVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR |
4HE8 Chain:N ((51-424)) | --------------------------------------------GPYAVDGVSQVFTLLALLG----ALWTVGLVRSGR--FEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWR--RGQGLEAALKYFLLGALAAAFFLYGAALFYGATGSLVLGAPGE--GPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLFMATS-VKAAAFAALLRVAAP---------PEALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNA--------------QALGFYLLTYVLATGLAFAVLSQIS--PDRVPLEALRGLYRKDPLLGLAFLVAMLSLLGLPPLAGFWGKYLAFAEAARAGAWG----------VLVLALVTSAVSAYYYLGLGLAVFARPEETP----FRPGPPWARAAVVAAGVLLLALGLLPGLVLPALA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -389196 for 3524 contacts (-110.4/contact) +
2D Compatibility (PS) -39209 + (NN) -21006 + (LL) 21500
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -451111.0 ( -128.01 by residue)
QMean score : 0.417
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