Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD |
| 2ZXE Chain:G ((20-42)) | -------------------------------------------------------------------------------------------------------------------------------RVVGLIVAAVLCVIGIIILLAGK---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5866 for 81 contacts (-72.4/contact) +
2D Compatibility (PS) -2484 + (NN) -1353 + (LL) 18244
1D Compatibility (HY) -3200 + (ID) 100
Total energy: 5241.0 ( 64.70 by residue)
QMean score : -0.164
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