Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAG----VLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
4C7R Chain:A ((221-292)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACSLGLGALQIGAGL--SAANIIEDPSDWTIVGIVSVLTLAFIFSAISGVGKGIQYLSNANMVLAALLAIFVF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34469 for 318 contacts (-108.4/contact) +
2D Compatibility (PS) -6962 + (NN) -470 + (LL) 11848
1D Compatibility (HY) -8400 + (ID) 1200
Total energy: -39653.0 ( -124.69 by residue)
QMean score : 0.026
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