Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPR--SRYTKTEMADDLAAVLDGLGVAKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRDLGM-----LRNMWRFWYQIPMSLPVIGPRVISDPKGRYFRLLTGWVGGGFRVPDDDVR----------LYLDCMREPGHAEAGSRWYRTFQTREM--------LRWLRGEYND---------ARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
3I1Y Chain:A ((237-534)) | ---------MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT--PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL-------FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160948 for 2170 contacts (-74.2/contact) +
2D Compatibility (PS) -27574 + (NN) -8624 + (LL) 2256
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -216440.0 ( -99.74 by residue)
QMean score : 0.409
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