Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKD------MVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEK--LYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGVLKVDGEVG--------VKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKSLTH |
| 1DOS Chain:A ((24-353)) | ---------------AKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAK-KLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTEL-SKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNS--LNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKAN-EAYLQ--GQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142815 for 2549 contacts (-56.0/contact) +
2D Compatibility (PS) -34345 + (NN) -17048 + (LL) 1516
1D Compatibility (HY) -25600 + (ID) 6850
Total energy: -225142.0 ( -88.33 by residue)
QMean score : 0.481
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