Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
2W25 Chain:A ((4-50))
-------------------ALDDIDRILVRELAA---DGRATLSELATRAGLSVSAVQSRVRRLESRGV---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2W25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14219 for 276 contacts (-51.5/contact) +
2D Compatibility (PS) -5273 + (NN) -2294 + (LL) 5080
1D Compatibility (HY) 0 + (ID) 200
Total energy: -16906.0 ( -61.25 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2W25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W25-query.scw
PDB file :
Tito_Scwrl_2W25.pdb
: