Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVTVGSMNERVPDSSGLPLRAMVMVLLFLGVVFLLLVWQALG-SSPNSEDDSSAISTMTTTTAAPTSTSVKPAAPRAEVRVYNISGTEGAAARTADRLKAAGFTVTDVGNLSLPDVAATTVYYTEVEGERATADAVGRTLGAAVELRLPELSDQPPGVIVVVTG |
4M4R Chain:A ((355-418)) | ----CGSGVHYTPQQNGLKTTKVSITDLLAHTNYTFEIWAVNGVSKYNPNPDQSVSVTVTTNQAAPSS------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15355 for 278 contacts (-55.2/contact) +
2D Compatibility (PS) -7263 + (NN) -4874 + (LL) 6876
1D Compatibility (HY) 800 + (ID) 950
Total energy: -20766.0 ( -74.70 by residue)
QMean score : 0.220
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