Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVFSALLLAGVLSALALAVGGAVGMRLTSRVVEQRQRVATEWSGITVSQMLQCIVTLMPLGAAVVDTHRDVVYLNERAKELGLVRDRQLDDQAWRAARQALGGEDVEFDLSPRKRSATGRSGLSVHGHARLLSEEDRRFAVVFVHDQSDYARMEAARRDFVANVSHELKTPVGAMALLAEALLASADDSETVRRFAEKVLIEANRLGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAADNADIEVRTD-APSNLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRRRGANIEIAVTDRGIGIAPEDQERVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPALIEAYHDDERPEQAREPELRSNRSQREEELSR |
4BIY Chain:A ((75-293)) | --------------------------------------------------------------------------------------------------------------------------------------------------------RMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKEL----ERIETEAQRLDSMINDLLVMSRNQQKNALVSET-IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDG--ITITVDDDGPGVSPEDREQIFRPFYRTD---------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87371 for 1492 contacts (-58.6/contact) +
2D Compatibility (PS) -23224 + (NN) -18059 + (LL) 15544
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -130810.0 ( -87.67 by residue)
QMean score : 0.473
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