Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNILSRIFARTPSLRTRVVVATAIGAAIPVLIVGTVVWVGITNDRKERLDRRLDEAAGFAIPFVPRGLDEIPRSPNDQDALITVRRGNVIKSNSDITLPKLQDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLHRRVLLICTFAIGAAAVFAWLLAAFAVRPFKQLAEQTRSIDAGDEAPRVEVHGASEAIEIAEAMRGMLQRIWNEQNRTKEALASARDFAAVSSHELRTPLTAMRTNLEV----LSTLDLPDDQRKEVLNDVIRTQSR----IEATLSALERLAQGELSTSDDHVPVDITDLLDRAAHDAARIYPDLDVSL-----VPSPTCIIVGLPAGLRLAVDNAIANAVKHGGA----TLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSR-GSTASHS--GSGLGLALVAQQAQLHGGTASLENSPLGGARLVLRLPGPS |
| 3DGE Chain:A ((14-246)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLS--TLKEFL-EVIIDQSNHLENLLNELLDFSRLERKSLQINRE--KVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYID-PTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76151 for 1471 contacts (-51.8/contact) +
2D Compatibility (PS) -23122 + (NN) -9997 + (LL) 17160
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -110110.0 ( -74.85 by residue)
QMean score : 0.546
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