Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIAPYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRYRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPDNTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTGEVIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQWAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQL-RALAEDLADHHVVLDGEAVVLDSSGVPS-FSQMQNRGR----------DTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATS--LTVPELLPGDGAQAFACSRKH---GWEGVIAKRRDSRYQPGRRCASWVKDK-HWNTQEVVIGGWRAGEGGRSSGVGSLLMGI--PGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAKGITYVKPALVAEVRYSEWTPEGR------LRQSSWRGLRPDKKPSEVVRE |
4EQ5 Chain:A ((258-550)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEIKYDGARVQVHKNGNKVLIYSRRLENVTKSIPEVVERVKEALKPEKVIVEGELVAVEETGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDILYVDGQNMIDTPFMERRKVLESVVNSNEWIKSAENLITKSPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTMENLDLVVLGAEWGEGRRSGVLSSFLLGAYDPVKGDFVPVGKVGSGFTDEDLVEFTKMLKPLIKKEHGKEVEL-----------EPKVVIEVAYQEIQKSPKYESGFALRFPRYIALREDKGPED---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76527 for 1941 contacts (-39.4/contact) +
2D Compatibility (PS) -29503 + (NN) -16583 + (LL) 29600
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -118163.0 ( -60.88 by residue)
QMean score : 0.399
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