Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
3P2J Chain:A ((1-191))
MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFKVHKKSGAEVVTGRLAGTTVVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVASALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLIAQGLEPAQNTVHAW
General information:
TITO was launched using:
RESULT:
Template:
3P2J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106078 for 1603 contacts (-66.2/contact) +
2D Compatibility (PS) -20195 + (NN) -3477 + (LL) 0
1D Compatibility (HY) -21600 + (ID) 7700
Total energy: -159050.0 ( -99.22 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3P2J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P2J-query.scw
PDB file :
Tito_Scwrl_3P2J.pdb
: