Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSADNHQVPIEIRGLTKHF--GSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSV----RLLGGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDL-LARMRGGIDNAR-RAELIERFGLDP----TKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR-GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGDLSQIKGVEDISIEGTTVRAQVDSESLRELIQVLGHAGVRSLVSQPPTLEELFLRHYSLGPEVAAEQQVATP |
1OXU Chain:A ((2-247)) | -------VRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKI-LDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINEL---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88314 for 1856 contacts (-47.6/contact) +
2D Compatibility (PS) -25305 + (NN) -3447 + (LL) 5408
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -131758.0 ( -70.99 by residue)
QMean score : 0.409
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