Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
4I76 Chain:A ((5-75))
------SKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFENFLMKN----------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4I76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36628 for 444 contacts (-82.5/contact) +
2D Compatibility (PS) -8125 + (NN) -5724 + (LL) 10896
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -44731.0 ( -100.75 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_4I76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I76-query.scw
PDB file :
Tito_Scwrl_4I76.pdb
: