Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV
3WWV Chain:A ((4-65))
-------------------------------------------------------------------------------RTGKEEMIGLIGTVVEELN-PEGMIKVRGELWKARSKFN-GKIEKGEKVRVVDMDGLTLIVVRE-
General information:
TITO was launched using:
RESULT:
Template:
3WWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24115 for 442 contacts (-54.6/contact) +
2D Compatibility (PS) -6811 + (NN) 89 + (LL) 8212
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -27975.0 ( -63.29 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_3WWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WWV-query.scw
PDB file :
Tito_Scwrl_3WWV.pdb
: