Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVA---GHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGR-----WLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVV-----IGWGLAGYLWAATAGAVAWLLMLMA--SPTAR--S-----AASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLV--PLSAMQGNLIAHFVDR--RTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPD---YQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATV-ASTLL--LLLPM--PLETRTVIALLFGPTVGIAIHVAALARRPD |
| 5C6P Chain:A ((9-443)) | -----------------------FLKEIRLLTALALPMLLAQVAQVGIGFVDTVMAGG-AGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIWFGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALWIYIAKEKFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEAS-AFSFIVFLIAPF--GEDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWVLAVITVLSLVLFRSPLASM-YNDDPAVLSIASTVLLFAGLFQPADFTQCIASYALRGYKVTKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAVALVWCLEK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343088 for 3361 contacts (-102.1/contact) +
2D Compatibility (PS) -40188 + (NN) 3856 + (LL) 1664
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -390806.0 ( -116.28 by residue)
QMean score : 0.124
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