Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLPDDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFA--SPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLMAQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSFFANVVTTHT-WEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLR--------FAGGREITLGDLGAKRGILGGINAVIVGNYLTTLGRPAEADLELLDELQMPLKALNASL |
| 5FEP Chain:A ((43-293)) | -----------------------------------------------------EALFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYC---GLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQS---GEDPY-MPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITL-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5FEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131517 for 1830 contacts (-71.9/contact) +
2D Compatibility (PS) -26890 + (NN) -21069 + (LL) 6720
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -191806.0 ( -104.81 by residue)
QMean score : 0.519
|
|
|