Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRV--EDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM |
3L0G Chain:A ((30-294)) | --------------IHNALKEDLGDKGDITT-NSILINEKVNFAINTRENLVVCGIPI----LEEVFNMNKEHVKYEIHKKDGDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKVKIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVNGKS---VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNKDIGLDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116668 for 2081 contacts (-56.1/contact) +
2D Compatibility (PS) -28644 + (NN) -12913 + (LL) 2192
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -181183.0 ( -87.07 by residue)
QMean score : 0.666
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