Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAA--VLGGHDAVFLALPHGHSAVLAQQ-LSPETLIIDCGADFRLTDAAVWERFYGSSHAGSWP-------YGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIE----PAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLS--QLRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 2G17 Chain:A ((9-336)) | -------------IVGASGYAGAELVSYVNRHPHMTITALTVSA--QSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAHEVSHDLAPQFLQAGCVVFDLSGAFRVNDRAFYEKYYGFTH--QYPELLEQAVYGLAEW--NVDKLNTANLIAVPGCYPTAAQLSLKPLIDGGLLDLTQWPVIN--ATSGVSGAGRKAAISNSFCEV--SLQPYGVF-THRHQPEIAVHLGA------EVIFTPHLGNFPRGILETITCRLKAGVTHAQVADVLQKAYGDKPLVRLYDKG-VPALKNVVGLPFCDIGFAV--QGEHLIVVATEDNLLKGAAAQAVQCANIRFGFAETQSL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221606 for 2699 contacts (-82.1/contact) +
2D Compatibility (PS) -34006 + (NN) -13725 + (LL) 2364
1D Compatibility (HY) -25200 + (ID) 6150
Total energy: -298323.0 ( -110.53 by residue)
QMean score : 0.370
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