Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIDPDQIRAEIDALLASLPDPADAENGPSLAELEGIARRLSEAHEVLLAALESAEKG
2KVC Chain:A ((73-89))
---------------------------LPSPEDVERVRARLAAQ--------------
General information:
TITO was launched using:
RESULT:
Template:
2KVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1151 for 61 contacts (18.9/contact) +
2D Compatibility (PS) -2097 + (NN) -2725 + (LL) 3012
1D Compatibility (HY) -800 + (ID) 250
Total energy: -1709.0 ( -28.02 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2KVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVC-query.scw
PDB file :
Tito_Scwrl_2KVC.pdb
: