Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDSCYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRNAQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR
2FEM Chain:A ((5-223))
-----APVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPG-LIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIK-------------LVPAADALVLDSTTLSIEQVIEKALQYARQK-----
General information:
TITO was launched using:
RESULT:
Template:
2FEM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124962 for 1631 contacts (-76.6/contact) +
2D Compatibility (PS) -22624 + (NN) -14418 + (LL) 1472
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -182582.0 ( -111.94 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_2FEM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEM-query.scw
PDB file :
Tito_Scwrl_2FEM.pdb
: