Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
3TQM Chain:A ((36-88))
-------------NIHIIFHINKLKKIVDANVKLPGSTINAQAESD-DM----------YKTVDLLMHKLETQLSKY-----------------
General information:
TITO was launched using:
RESULT:
Template:
3TQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2441 for 316 contacts (-7.7/contact) +
2D Compatibility (PS) -5436 + (NN) 417 + (LL) 2540
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -7170.0 ( -22.69 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_3TQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQM-query.scw
PDB file :
Tito_Scwrl_3TQM.pdb
: