Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLR--DAGPVV---FMNGWYYLTRREDVLAALRNPKVFSSRKALQP--PGNPLPVVPLAFDPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGECEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMS-DRPHPTEADVAAARE-LLEYLTAMVAERRRNPGPDVLSQ---VQIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAPRVTTEPVTVGGMTLPAGSPVRLCMAAV---NRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALKNLPLRWS |
3LXI Chain:A ((43-415)) | ------------------------------AWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSD-MEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVD---LSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLK-DRAVPIYHSGIVAAVENIPLEWE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216760 for 2935 contacts (-73.9/contact) +
2D Compatibility (PS) -39065 + (NN) -20247 + (LL) 1588
1D Compatibility (HY) -24400 + (ID) 6250
Total energy: -305134.0 ( -103.96 by residue)
QMean score : 0.530
|
|
|