Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRELVTTAAITGAAIGGAPVAGADPQRYDGDVPGMNYDASLGAPCSSWERFIFGRGPSGQAEACHFPPPNQFPPAETGYWVISYPLYGVQQVGAPCPKPQAAAQSPDGLPMLCLGARGWQPGWFTGAGFFPPEP |
5A0Z Chain:A ((404-461)) | --------------------------------------------------------------------------------------------VGHPCGKPRAGAFSPD--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1090 for 42 contacts (26.0/contact) +
2D Compatibility (PS) -1735 + (NN) -3548 + (LL) 3956
1D Compatibility (HY) -800 + (ID) 550
Total energy: -1587.0 ( -37.79 by residue)
QMean score : 0.658
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