Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTCEMRESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEGRQVRYALADSHLARALGELVQV---VLAVDTDQPCVAERAASGEAVEMTGS
4OMZ Chain:A ((25-103))
----------------AMANPKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYGA--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4OMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76449 for 508 contacts (-150.5/contact) +
2D Compatibility (PS) -8128 + (NN) -3951 + (LL) 3668
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -90910.0 ( -178.96 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_4OMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OMZ-query.scw
PDB file :
Tito_Scwrl_4OMZ.pdb
: