Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELA--DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG-SIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALE--LGPSGIRVNSIHPGLVKTPMTDWVP---EDIFQ---TALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAGLAHNDFGAVEVSSQPEWVT |
| 1ZK0 Chain:A ((1-250)) | -SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126885 for 2047 contacts (-62.0/contact) +
2D Compatibility (PS) -25562 + (NN) -6265 + (LL) 1264
1D Compatibility (HY) -16000 + (ID) 5300
Total energy: -178748.0 ( -87.32 by residue)
QMean score : 0.662
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