Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMY--RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
2GPE Chain:A ((2-48))
----GTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6645 for 190 contacts (-35.0/contact) +
2D Compatibility (PS) -5136 + (NN) -5016 + (LL) 1468
1D Compatibility (HY) 1200 + (ID) 200
Total energy: -14329.0 ( -75.42 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_2GPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPE-query.scw
PDB file :
Tito_Scwrl_2GPE.pdb
: