Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTPRPNPRRVVIEVQIERVLGSADLLDRA
2ASF Chain:A ((11-135))
----------SDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTPRPNPRRVVIEVQIERVLGSADLLD--
General information:
TITO was launched using:
RESULT:
Template:
2ASF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49435 for 931 contacts (-53.1/contact) +
2D Compatibility (PS) -13865 + (NN) -9474 + (LL) 1348
1D Compatibility (HY) -15200 + (ID) 6250
Total energy: -92876.0 ( -99.76 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_2ASF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASF-query.scw
PDB file :
Tito_Scwrl_2ASF.pdb
: