Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAA-DLLVALDRNHARLL----RQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
4Z9B Chain:A ((15-149))
------VLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQVKTCKAKIELLGSYDPQK---QLIIEDPYYGNDSDFETVY------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Z9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63416 for 1004 contacts (-63.2/contact) +
2D Compatibility (PS) -14321 + (NN) -7053 + (LL) 1352
1D Compatibility (HY) -13600 + (ID) 2600
Total energy: -99638.0 ( -99.24 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_4Z9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z9B-query.scw
PDB file :
Tito_Scwrl_4Z9B.pdb
: