Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSG-QPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
2QTM Chain:A ((7-187))
IGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPY-----------PITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
2QTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123692 for 1299 contacts (-95.2/contact) +
2D Compatibility (PS) -19395 + (NN) -8070 + (LL) 1324
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -168683.0 ( -129.86 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2QTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTM-query.scw
PDB file :
Tito_Scwrl_2QTM.pdb
: