Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQ---FNLVHGSDSAESAQREIALWFPGA
2DXE Chain:A ((7-140))
-TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDP-KDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFF---
General information:
TITO was launched using:
RESULT:
Template:
2DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78150 for 1014 contacts (-77.1/contact) +
2D Compatibility (PS) -14255 + (NN) -5277 + (LL) 232
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -117250.0 ( -115.63 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXE-query.scw
PDB file :
Tito_Scwrl_2DXE.pdb
: