Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALRRRHEPDGWPFSQRSEKPNAVRHAVRCSAVSAAASTANGTPVNWVSGRVTRAMGVHRQTRGGVASVHADSLRGAVLVHGQLRNSIPISANVPASGANTKSSIAH
3CM1 Chain:A ((31-81))
--------------DYSVDDPYAIRAAFHVG---------DDEPVEWIFARELLTVGIIRETGEGDVRIWPSQD---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CM1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1807 for 258 contacts (7.0/contact) +
2D Compatibility (PS) -5475 + (NN) -3262 + (LL) 3252
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -6678.0 ( -25.88 by residue)
QMean score : 0.104
(partial model without unconserved sides chains):
PDB file :
Tito_3CM1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CM1-query.scw
PDB file :
Tito_Scwrl_3CM1.pdb
: