Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVI--PASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGG-PTSAPIYASIDDNPS--YEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGL-GSYFWQHNWGSPK--GYT--HPAAHLHQVEIDKRKVGGV--GVDVNQILKPQFGQWA |
| 4KRU Chain:A ((17-209)) | -----------------------------------NNNLKGIDVSNWKGNINFESVKNDGVEVVYIKATEGNY-----FKDKYAKQNYEGAKEQGLS-VGFYHFFRAN--------KGAKDQANFFIDYLNEIGAVNYDCKLALDIETTEGVGVRDLTSMCIEFLEEVKRL-TGKEVVVYTYTSFANNNLDSRLGNYPVWIAHYGV-NTPGANNIWSSWVGFQYSEN-GSVAGVNGGCDMNEFTE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46765 for 1472 contacts (-31.8/contact) +
2D Compatibility (PS) -19527 + (NN) -8848 + (LL) 3668
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -79422.0 ( -53.96 by residue)
QMean score : 0.407
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