Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE |
3HHT Chain:A ((126-144)) | ---------------------------------------------------------------------------------------------------------------YPWPLLG--------LPPSWYKEPAYRARVV--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2223 for 71 contacts (31.3/contact) +
2D Compatibility (PS) -1805 + (NN) 234 + (LL) 17776
1D Compatibility (HY) 800 + (ID) 100
Total energy: 19128.0 ( 269.41 by residue)
QMean score : -0.236
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