Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
1G3Y Chain:A ((3-225))
--DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHALAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV---------PGTRVIDAA--MPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEI-VDR--HITLSHNG-KDVELLDDLAHTIRIEE-
General information:
TITO was launched using:
RESULT:
Template:
1G3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100117 for 1602 contacts (-62.5/contact) +
2D Compatibility (PS) -23475 + (NN) -11478 + (LL) -288
1D Compatibility (HY) -19600 + (ID) 6400
Total energy: -161358.0 ( -100.72 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_1G3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3Y-query.scw
PDB file :
Tito_Scwrl_1G3Y.pdb
: