Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRNLSAHS |
1DGS Chain:B ((387-414)) | -----------RVLKERRTGKERPIRWPEACPECGHRLV------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -331 for 85 contacts (-3.9/contact) +
2D Compatibility (PS) -2882 + (NN) -2910 + (LL) 8768
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -355.0 ( -4.18 by residue)
QMean score : 0.496
|
|
|