Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDM-AALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
4MTN Chain:A ((5-322)) | -GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGREIDR-D----EL-GDILGRISAQT-KQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEG----SAITVNIG----KAEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGERIEVVRWNDSLQVLVPNAMQPSEVEDVILCPM-LGRVLVLVRDDQLSLAIGKRGQNVRLASKLVGWDIDVMTREELDQQL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129115 for 2378 contacts (-54.3/contact) +
2D Compatibility (PS) -34244 + (NN) -13417 + (LL) 1676
1D Compatibility (HY) -22400 + (ID) 5600
Total energy: -203100.0 ( -85.41 by residue)
QMean score : 0.496
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