Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XBP Chain:A ((1-112))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGENGDGKIFVSPVDQTIRIRTGEKNADAI
General information:
TITO was launched using:
RESULT:
Template:
2XBP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60511 for 718 contacts (-84.3/contact) +
2D Compatibility (PS) -12315 + (NN) -2431 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -91007.0 ( -126.75 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2XBP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XBP-query.scw
PDB file :
Tito_Scwrl_2XBP.pdb
: