Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLT---DANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLL-AADGLPVGAYAVL---RPPRSTLHRQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTLARGVGLH |
| 3K3P Chain:A ((6-334)) | ------------LVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQP----------------S--DKLMTNDTIIASQKIK----PSDIYEEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVALIEGEPLESKLAEVE-EKLIYPVFVKPAN------ISKAENRTDLKQAIALALKYDSRVLIEQGVDAREIEVGILGNTD--VKTTLPGEIV-----------------------TMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMPGFT--SMYPLLWENMGLSYSVLIEELV----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -214108 for 2381 contacts (-89.9/contact) +
2D Compatibility (PS) -32941 + (NN) -19583 + (LL) 3124
1D Compatibility (HY) -30800 + (ID) 6250
Total energy: -300558.0 ( -126.23 by residue)
QMean score : 0.568
|
|
|